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faq [2018/12/19 02:40]
flack
faq [2018/12/19 11:14]
flack
Line 18: Line 18:
 To split a smi.gz / smiles.gz file into multiple **gzip compressed chunks** use a command like this: To split a smi.gz / smiles.gz file into multiple **gzip compressed chunks** use a command like this:
 <​code>​ <​code>​
-gzip -dc your.smi.gz | split --verbose --lines=<​size>​ --numeric-suffixes --suffix-length=<​suffix_length>​ --additional-suffix='​.smi'​ --filter='​gzip -9> $FILE' - your__+gzip -dc your.smi.gz | split --verbose --lines=<​size>​ --numeric-suffixes --suffix-length=<​suffix_length>​ --additional-suffix='​.smi.gz' --filter='​gzip -9> $FILE' - your__
 </​code>​ </​code>​
  
 For example to split the Mcule Purchasable (Full) smi.gz file into 1M **gzip compressed chunks** use: For example to split the Mcule Purchasable (Full) smi.gz file into 1M **gzip compressed chunks** use:
 <​code>​ <​code>​
-gzip -dc mcule_purchasable_full_180817.smi.gz | split --verbose --lines=1000000 --numeric-suffixes --suffix-length=10 --additional-suffix='​.smi'​ --filter='​gzip -9> $FILE' - mcule_purchasable_full_180817__+gzip -dc mcule_purchasable_full_180817.smi.gz | split --verbose --lines=1000000 --numeric-suffixes --suffix-length=10 --additional-suffix='​.smi.gz' --filter='​gzip -9> $FILE' - mcule_purchasable_full_180817__
 </​code>​ </​code>​
  
faq.txt ยท Last modified: 2018/12/21 15:00 by flack